During a capture, the application on the target device can generate software-defined events and counters. These software-defined counters automatically appear in the Live view when they are first generated, but they are not available to select in the Select Counters dialog.
When you apply a template in the Live view, the template is applied to any existing counters. After you have applied a template, any new software counters generated will automatically appear in the Live view, even if they are not part of the selected template. To filter out any unwanted series, reapply the template.